pip install absl-py==0.13.0 biopython==1.79 chex==0.0.7 dm-haiku==0.0.4 dm-tree==0.1.6 immutabledict==2.0.0 jax==0.2.14 ml-collections==0.1.0 numpy==1.19.5 scipy==1.7.0 tensorflow==2.5.0 pandas==1.3.4
pip install –upgrade jax==0.2.14 jaxlib==0.1.69+cuda111 -f https://storage.googleapis.com/jax-releases/jax_releases.html
cd /root/anaconda3/envs/alphafold/lib/python3.8/site-packages/ && patch -p0 < /home/tr/alphafold/docker/openmm.patch
/home/tr/machine_test/docker/openmm.patch